BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014G12SP1|AL426740
(783 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1542 1338 0.0
>3x_Contig1542
Length = 13810
Score = 1338 bits (659), Expect = 0.0
Identities = 742/783 (94%), Gaps = 6/783 (0%)
Strand = Plus / Minus
Query: 1 atcatagtgcgtacaaagtcaaaratagataatatgggtagagcatgnaagtagcattcg 60
||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 1998 atcatagtgcgtacatagtcaaaaatagataatatgggtagagcatgaaagtagcattcg 1939
Query: 61 taaatcccgtaccacgttactctcgctcacgagcttaccacatttccaaatcgacagaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1938 taaatcccgtaccacgttactctcgctcacgagcttaccacatttccaaatcgacagaca 1879
Query: 121 ctacacattttgcttactgactaatttttttttttcccttcaaagggtttctccatttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1878 ctacacattttgcttactgactaatttttttttttcccttcaaagggtttctccatttgt 1819
Query: 181 gtatcgaatccctatcgttaatgggcatgcvagcvaatttctgctgcaatttgactttcg 240
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 1818 gtatcgaatccctatcgttaatgggcatgcaagcaaatttctgctgcaatttgactttcg 1759
Query: 241 taactggtgttcgttttttcttttatcaggrattttaarattttgtatttggtaaaragg 300
|||||| ||||||||||||||||||||||| ||||||| |||||||||||| |||| ||
Sbjct: 1758 taactg-tgttcgttttttcttttatcaggaattttaaaattttgtatttg-taaaaag- 1702
Query: 301 kccaaaaggctagaatgggatatattatttattaagcactggkgararatatttcagtra 360
||||||||||||| ||||||||||||||||||||||||| || | |||||||||| |
Sbjct: 1701 tccaaaaggctagat--ggatatattatttattaagcactggtgaaa-atatttcagtaa 1645
Query: 361 ggraactaaaggkgaagaagaagcaaggragagggaatttctcacgcaggaacgactttc 420
|| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1644 ggaaactaaaggtgaagaagaagcaaggaagagggaatttctcacgcaggaacgactttc 1585
Query: 421 tagaactgagtttgagagaaggkacattatttgatatcagaggraatctcttattgtttg 480
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 1584 tagaactgagtttgagagaaggtacattatttgatatcagaggaaatctcttattgtttg 1525
Query: 481 ctctctgacactttgggtattctttcttttttttattattattctagtttatctcaaggk 540
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1524 ctctctgacactttggatattctttcttttttttattattattctagtttatctcaaggt 1465
Query: 541 actctactttactttgatttactcccgnacagnnttccttnttgttaccggrcagaragt 600
||||||||||||||||||||||||||| |||| |||||| |||||||||| |||| |||
Sbjct: 1464 actctactttactttgatttactcccgaacagaattccttattgttaccggacagaaagt 1405
Query: 601 tgaaggckacggkaacaggrtacaagaataggtgactgattgarcgaatctcttaattat 660
||||||| |||| |||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1404 tgaaggctacggtaacaggatacaagaataggtgactgattgaacgaatctcttaattat 1345
Query: 661 vttctctgtggattttttttattttattaggaatmtmaaagagatttggatmtaaggtat 720
||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||
Sbjct: 1344 attctctgtggattttttttattttattaggaatctcaaagagatttggatctaaggtat 1285
Query: 721 ggaagctgatggcagtgagtccttaattaagagtgaaatggactccggtagaaamatgaa 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1284 ggaagctgatggcagtgagtccttaattaagagtgaaatggactccggtagaaacatgaa 1225
Query: 781 taa 783
|||
Sbjct: 1224 taa 1222
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.715 1.33
Gapped
Lambda K H
1.41 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,615
Number of Sequences: 1807
Number of extensions: 11615
Number of successful extensions: 304
Number of sequences better than 1.0e-20: 1
length of query: 783
length of database: 10,358,551
effective HSP length: 16
effective length of query: 767
effective length of database: 10,329,639
effective search space: 7922833113
effective search space used: 7922833113
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (100.0 bits)